Feature Articles: Drug Discovery: Benefits of... -
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Published on: 3/15/2006
Last Visited: 4/1/2006
Structure-based drug design played a large role in the discovery and optimization of an inhibitor of the anti-apoptotic proto-oncogene Bcl that is planned to begin Phase I studies sometime in 2006, says Jonathan Greer, Ph.D., director, structural biology, advanced technology, global pharmaceutical R&D, Abbott Labs.
The company employed its SARbyNMR technology, screening approximately 10,000 fragments (250 Da or smaller) by NMR to identify weak binders to a desirable protein target, explains Dr. Greer.When two fragments are identified that bind to appropriate, adjacent sites on the target, each one can be optimized separately and then linked together.Once connected, the two fragments get the benefit of binding to two adjacent sites and become a potent, viable lead.
The rationale for SARbyNMR is that screeners can tap into vast chemical diversity without physically screening several million compounds.Structure-based drug design was also instrumental in optimizing other properties beyond potency in Abbotts Bcl-2 inhibitor, says Dr. Greer.