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This profile was last updated on 10/3/15  and contains information from public web pages and contributions from the ZoomInfo community.

Dr. Richard A. Bonneau

Wrong Dr. Richard A. Bonneau?

Affiliate Faculty

Phone: (206) ***-****  
Local Address:  New York City , New York , United States
Institute for Systems Biology
401 Terry Ave. North
Seattle , Washington 98109
United States

Company Description: The Institute for Systems Biology (ISB) is an internationally renowned, non-profit research institute headquartered in Seattle and dedicated to the study and...   more
Background

Employment History

Board Memberships and Affiliations

  • Joint Member
    New York University , Human Proteome Folding
  • Member of the Computer Science Faculty
    NYU's Courant Institute of Mathematical Sciences
  • Joint Member
    New York University , Human Proteome Folding
  • Predoctoral Fellow In Biochemistry
    University of Washington

Education

  • Department of Biology
    New York University
  • Ph.D. , biochemistry
    University of Washington
  • PhD
    New York University
115 Total References
Web References
Peptide Atlas
www.peptideatlas.org [cached]
Mark R. Flory (ISB), Hookeun Lee (ISB), Richard Bonneau (ISB), Parag Mallick (ISB), Kyle Serikawa (UW), David R. Morris (UW), & Ruedi Aebersold (ISB)
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Mark R. Flory, Hookeun Lee, Richard Bonneau, Parag Mallick, Kyle Serikawa, David R. Morris, & Ruedi Aebersold, 2005, (submitted)
Richard ...
www.systemsbiology.org [cached]
Richard Bonneau Affiliate Faculty (206) 732-1463
Institute for Systems Biology: Affiliate Faculty Groups
www.systemsbiology.net [cached]
Rich Bonneau Computational Biology and Structural Biology
Institute for Systems Biology: Bonneau Group
www.systemsbiology.net [cached]
Bonneau Group | Rich Bonneau Institute for Systems Biology: Bonneau Group
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Rich Bonneau
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Rich Bonneau
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Dr. Bonneau is a faculty member at New York University's Center for Comparative Functional Genomics, where he is a joint member of both the Biology and Computer Science departments. His affiliate position with the Institute for Systems Biology offers many exciting possibilities for exchange of ideas between these two centers, both focused on applying functional genomics to a wide range of systems. His research efforts are focused on making computational tools, algorithms and methods for systems-wide elucidation of biological systems. His research aims to develop computational methods at the intersection of two interrelated fields: protein structure and functional genomics. Rich is also currently the technical lead on two grid computing collaborations with IBM -- the first and second phases of the Human Proteome Folding Project.
Dr. Bonneau did his doctoral work at the University of Washington in Seattle working with David Baker on the state of the art protein structure modeling and prediction platform, Rosetta.
...
Rich is currently a member of the Rosetta commons and continues to develop and work with Rosetta as part of several projects in the lab. Before joining NYU he worked as a Senior Scientist -- with Leroy Hood -- at the Institute for Systems Biology. Rich also oversees TACITUS's ( www.tacitus.com) approach to data gaming for all applications that focus on genomics, computational biology and cell biology.
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WCGrid Message Board Posts by Dr. Bonneau, Description of HPF Project. Results from the Human Proteome Folding Project can be found at the Public Data Repository associated with the Yeast Resource Center.
...
Iliana Avila-Campillo, Kevin Drew , John Lin, David J. Reiss, Richard Bonneau.
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Madar, A., Bonneau, R. Learning global models of transcriptional regulatory networks from data. Chapter in Computational Systems Biology (2007). Humana Press, [In press]
Bonneau, R. (2007) De Novo Structure Prediction: methods and applications. Chapter 12 in Bioinformatics: From genomes to therapies. Bioinformatics- from Genomes to Therapies. (2007) Wiley-VCH. ISBN-10: 3-527-31278-1
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Zhang, H., Loriaux, P., Eng, J., Bonneau, R., Smith, R & Aebersold, R. UniPep, a database for human N-linked glycosites: A resource for biomarker discovery. Genome Biology, [In Press]
Institute for Systems Biology: Bonneau Group
www.systemsbiology.org [cached]
Bonneau Group | Rich Bonneau Institute for Systems Biology: Bonneau Group
...
Rich Bonneau
...
Rich Bonneau
...
Dr. Bonneau is a faculty member at New York University's Center for Comparative Functional Genomics, where he is a joint member of both the Biology and Computer Science departments. His affiliate position with the Institute for Systems Biology offers many exciting possibilities for exchange of ideas between these two centers, both focused on applying functional genomics to a wide range of systems. His research efforts are focused on making computational tools, algorithms and methods for systems-wide elucidation of biological systems. His research aims to develop computational methods at the intersection of two interrelated fields: protein structure and functional genomics. Rich is also currently the technical lead on two grid computing collaborations with IBM -- the first and second phases of the Human Proteome Folding Project.
Dr. Bonneau did his doctoral work at the University of Washington in Seattle working with David Baker on the state of the art protein structure modeling and prediction platform, Rosetta.
...
Rich is currently a member of the Rosetta commons and continues to develop and work with Rosetta as part of several projects in the lab. Before joining NYU he worked as a Senior Scientist -- with Leroy Hood -- at the Institute for Systems Biology. Rich also oversees TACITUS's ( www.tacitus.com) approach to data gaming for all applications that focus on genomics, computational biology and cell biology.
...
WCGrid Message Board Posts by Dr. Bonneau, Description of HPF Project. Results from the Human Proteome Folding Project can be found at the Public Data Repository associated with the Yeast Resource Center.
...
Iliana Avila-Campillo, Kevin Drew , John Lin, David J. Reiss, Richard Bonneau.
...
Madar, A., Bonneau, R. Learning global models of transcriptional regulatory networks from data. Chapter in Computational Systems Biology (2007). Humana Press, [In press]
Bonneau, R. (2007) De Novo Structure Prediction: methods and applications. Chapter 12 in Bioinformatics: From genomes to therapies. Bioinformatics- from Genomes to Therapies. (2007) Wiley-VCH. ISBN-10: 3-527-31278-1
...
Zhang, H., Loriaux, P., Eng, J., Bonneau, R., Smith, R & Aebersold, R. UniPep, a database for human N-linked glycosites: A resource for biomarker discovery. Genome Biology, [In Press]
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